Source code for aiida.tools.dbimporters.plugins.tcod

# -*- coding: utf-8 -*-

from aiida.tools.dbimporters.plugins.cod import (CodDbImporter,
                                                 CodSearchResults, CodEntry)

__copyright__ = u"Copyright (c), This file is part of the AiiDA platform. For further information please visit http://www.aiida.net/. All rights reserved."
__license__ = "MIT license, see LICENSE.txt file."
__version__ = "0.7.0"
__authors__ = "The AiiDA team."


[docs]class TcodDbImporter(CodDbImporter): """ Database importer for Theoretical Crystallography Open Database. """ def __init__(self, **kwargs): super(TcodDbImporter, self).__init__(**kwargs) self._db_parameters = {'host': 'www.crystallography.net', 'user': 'cod_reader', 'passwd': '', 'db': 'tcod'} self.setup_db(**kwargs)
[docs] def query(self, **kwargs): """ Performs a query on the TCOD database using ``keyword = value`` pairs, specified in ``kwargs``. :return: an instance of :py:class:`aiida.tools.dbimporters.plugins.tcod.TcodSearchResults`. """ query_statement = self.query_sql(**kwargs) self._connect_db() results = [] try: self._cursor.execute(query_statement) self._db.commit() for row in self._cursor.fetchall(): results.append({'id': str(row[0]), 'svnrevision': str(row[1])}) finally: self._disconnect_db() return TcodSearchResults(results)
[docs]class TcodSearchResults(CodSearchResults): """ Results of the search, performed on TCOD. """ _base_url = "http://www.crystallography.net/tcod/" def __init__(self, results): super(TcodSearchResults, self).__init__(results) self._return_class = TcodEntry
[docs]class TcodEntry(CodEntry): """ Represents an entry from TCOD. """ _license = 'CC0' def __init__(self, uri, db_name='Theoretical Crystallography Open Database', db_uri='http://www.crystallography.net/tcod', **kwargs): """ Creates an instance of :py:class:`aiida.tools.dbimporters.plugins.tcod.TcodEntry`, related to the supplied URI. """ super(TcodEntry, self).__init__(db_name=db_name, db_uri=db_uri, uri=uri, **kwargs)